This article explains how to get started with MTD IT in Capium, including how to handle new clients and existing clients already in your system.
It is designed for accountants and bookkeepers who want a clear, practical understanding of the end-to-end MTD IT journey, from client setup through to quarterly submissions and final declaration.
Before You Start: Key Concepts to Understand
Before setting up your first MTD IT client, it’s important to understand how MTD IT works in practice.
1. MTD IT is cumulative
Each quarterly submission is year-to-date, not standalone
HMRC receives cumulative totals from 6 April to the end of the quarter
If something is missed earlier, it is corrected in a later quarter, not resubmitted
This is different from VAT and is critical to understand.
2. Digital records come from a source system
Capium does not replace your bookkeeping judgement.
Digital records can come from:
Capium Bookkeeping
Capium 365
Manual Bridging entry (where appropriate)
MTD IT uses these records for reporting, but the source system remains the primary record.
3. Some actions do not sync back
Changes made in MTD IT (for example, marking an expense as disallowable) may:
Affect the MTD IT submission
Not automatically update bookkeeping or 365
Best practice is always to correct data at the source.
Step 1: Client Setup (New vs Existing Clients)
New Clients (Recommended Approach)
For brand new clients:
Create the Individual first
Link a Sole Trader business to the Individual
(The sole trader is treated as a source of income)Add core details (NI number, UTR, contact details)
Confirm the client appears in Bookkeeping / 365 as expected
This ensures the client structure aligns with how MTD IT works.
Existing Clients Already in Capium
If the client already exists:
Review how they are currently set up
Confirm the Individual and Sole Trader relationship is correct
Ensure bookkeeping data is clean before starting MTD IT
Do not assume historic data is MTD-ready
Existing clients can be enrolled into MTD IT without disrupting their prior Self Assessment history.
Step 2: Importing the Client into MTD IT
Once the client is ready:
Go to MTD IT
Import the client from MyAdmin
Start HMRC authorisation
Complete the HMRC connection and confirm authorisation
Sync business information from HMRC
You cannot create MTD IT records until the business information is successfully synced.
Step 3: Creating and Managing Quarterly Periods
Once authorised:
Quarterly periods are created automatically
Each quarter represents a reporting window, not a fixed dataset
You can:
Import digital records
Add manual records (where required)
Review summaries before submission
Step 4: Digital Records and Disallowable Expenses
Importing Digital Records
You can import records from:
Bookkeeping
Capium 365
Records imported from source systems:
Cannot be edited or deleted in MTD IT
Must be corrected at the source if wrong
Disallowable Expenses
Disallowable status may be suggested based on account mapping
You may adjust this in MTD IT for reporting purposes
This change does not automatically update bookkeeping
Best practice:
If something is disallowable, fix it in bookkeeping as well.
Step 5: Locking a Period (Optional but Recommended)
You can lock a period once you are confident the data is correct.
When a period is locked:
No new records can be imported
No edits can be made
This supports audit control and internal governance
Locking does not submit data to HMRC — it only controls editing.
Step 6: Submitting a Quarterly Update
To submit a quarter:
Review the Summary of Each Category
Review the Cumulative Summary
Confirm the data is correct
Submit to HMRC
Once submitted:
The quarter is marked as submitted
Records used in that submission cannot be deleted
Step 7: Missed or Late Transactions
If a transaction is missed after a quarter has been submitted:
Do not amend the previously submitted quarter
Add or correct the transaction in a later quarter
It will be included in the next cumulative submission
This is expected behaviour under MTD IT and mirrors HMRC guidance.
Step 8: Null Returns
If no income or expenses exist for a quarter:
Capium will prompt you to submit a null return
This confirms to HMRC that no activity occurred
Null returns are valid and supported
Step 9: Final Declaration (End of Year)
At year end:
Review cumulative data
Add any additional information required (where applicable)
Review estimated tax figures
Submit the Final Declaration to HMRC
Once submitted:
Submission status and date are shown
HMRC confirmation is recorded within Capium
Important Notes and Limitations
MTD IT does not replace professional judgement
Not all income types are currently mandated under MTD IT
Eligibility decisions remain the responsibility of the accountant
HMRC APIs and rules will continue to evolve
Capium will continue to update the product as HMRC expands MTD IT requirements.
This article covers the core end-to-end journey.
Additional detailed guides will be available for:
Disallowable expenses
Missed transactions
Working with existing clients
Advanced reporting
Practice management integration